Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs921022 | chr5:36082654 | G/T | 4.93E-7 | 213 | 17.02 | 10.83 | 6.83 | KM Plot |
| KIRP | rs9257140 | chr6:28727121 | G/A | 4.09E-7 | 207 | 15.88 | 10.25 | 9.77 | KM Plot |
| KIRP | rs9257167 | chr6:28741734 | C/A | 4.13E-7 | 206 | 16.45 | 6.9 | 9.77 | KM Plot |
| KIRP | rs9278063 | chr6:28734987 | CAA/C | 4.09E-7 | 207 | 15.88 | 10.25 | 9.77 | KM Plot |
| KIRP | rs928652 | chr1:89849201 | C/G | 1.01E-5 | 214 | 16.53 | 14.52 | 4.07 | KM Plot |
| KIRP | rs928653 | chr1:89849350 | G/A | 1.01E-5 | 214 | 4.07 | 14.52 | 16.53 | KM Plot |
| KIRP | rs928654 | chr1:89849441 | T/G | 1.01E-5 | 214 | 4.07 | 14.52 | 16.53 | KM Plot |
| KIRP | rs9306203 | chr22:18471852 | A/G | 0.00052 | 214 | 9.78 | 20.02 | 15.2 | KM Plot |
| KIRP | rs932087 | chr1:48824156 | A/T | 2.36E-7 | 214 | 14.87 | 19.87 | 11.03 | KM Plot |
| KIRP | rs932747 | chr1:63805129 | T/C | 3.07E-6 | 211 | 14.83 | 18 | 8.03 | KM Plot |
| KIRP | rs9328600 | chr16:47748806 | C/T | 7.92E-8 | 214 | 17.2 | 12.63 | 12.85 | KM Plot |
| KIRP | rs9342122 | chr6:88477702 | T/C | 1.93E-6 | 208 | 8.2 | 10.03 | 18.25 | KM Plot |
| KIRP | rs9344721 | chr6:88477520 | A/G | 2.74E-6 | 210 | 8.2 | 10.03 | 18.02 | KM Plot |
| KIRP | rs9348709 | chr6:26360311 | G/A | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9348712 | chr6:26366511 | T/A | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |